{"prefix": "obi", "name": "Ontology for Biomedical Investigations", "description": "The Ontology for Biomedical Investigations (OBI) project is developing an integrated ontology for the description of biological and clinical investigations. The ontology will represent the design of an investigation, the protocols and instrumentation used, the material used, the data generated and the type analysis performed on it. Currently OBI is being built under the Basic Formal Ontology (BFO).", "pattern": "^\\d{7}$", "uri_format": "http://purl.obolibrary.org/obo/OBI_$1", "providers": [], "homepage": "http://obi-ontology.org", "repository": "https://github.com/obi-ontology/obi", "contact": {"name": "Bjoern Peters", "orcid": "0000-0002-8457-6693", "email": "bpeters@lji.org", "github": "bpeters42"}, "example": "0400109", "license": "CC-BY-4.0", "version": "2022-07-11", "download_owl": "http://purl.obolibrary.org/obo/obi.owl", "download_obo": "https://github.com/obi-ontology/obi/raw/master/views/obi.obo", "banana": "OBI", "banana_peel": ":", "deprecated": false, "mappings": {"aberowl": "OBI", "biocontext": "OBI", "bioportal": "OBI", "fairsharing": "FAIRsharing.284e1z", "go": "OBI", "miriam": "obi", "n2t": "obi", "obofoundry": "obi", "ols": "obi", "ontobee": "OBI", "prefixcommons": "obi"}, "synonyms": [], "publications": [{"pubmed": "27128319", "doi": "10.1371/journal.pone.0154556", "pmc": "PMC4851331", "title": "The Ontology for Biomedical Investigations.", "year": 2016}, {"pubmed": "25632945", "doi": "10.1093/database/bau132", "pmc": "PMC4309925", "title": "Modeling a microbial community and biodiversity assay with OBO Foundry ontologies: the interoperability gains of a modular approach.", "year": 2015}, {"pubmed": "23734660", "doi": "10.1186/2041-1480-4-s1-s6", "pmc": "PMC3633001", "title": "Query enhancement through the practical application of ontology: the IEDB and OBI.", "year": 2013}, {"pubmed": "22180825", "doi": "10.4056/sigs.1994602", "pmc": "PMC3235517", "title": "Minimum Information about a Genotyping Experiment (MIGEN).", "year": 2011}, {"pubmed": "20626927", "doi": "10.1186/2041-1480-1-s1-s7", "pmc": "PMC2903726", "title": "Modeling biomedical experimental processes with OBI.", "year": 2010}], "appears_in": ["foodon"], "depends_on": [], "namespace_in_lui": true, "preferred_prefix": "OBI"}