appears_in: []
contact:
  email: lynn.schriml@gmail.com
  github: lschriml
  name: Lynn Schriml
  orcid: 0000-0001-8910-9851
depends_on: []
deprecated: false
description: The Pathogen Transmission Ontology describes the tranmission methods
  of human disease pathogens describing how a pathogen is transmitted from one host,
  reservoir, or source to another host. The pathogen transmission may occur either
  directly or indirectly and may involve animate vectors or inanimate vehicles.
download_obo: http://purl.obolibrary.org/obo/trans.obo
download_owl: http://purl.obolibrary.org/obo/trans.owl
example: '0000024'
homepage: https://github.com/DiseaseOntology/PathogenTransmissionOntology
license: CC0-1.0
mappings:
  aberowl: TRANS
  biocontext: TRANS
  bioportal: TRANS
  fairsharing: FAIRsharing.nygmp7
  obofoundry: trans
  ols: trans
  ontobee: TRANS
  prefixcommons: pt
name: Pathogen Transmission Ontology
pattern: ^\d{7}$
preferred_prefix: TRANS
prefix: trans
providers: []
publications:
- doi: 10.1093/nar/gkab1063
  pmc: PMC8728220
  pubmed: '34755882'
  title: The Human Disease Ontology 2022 update.
  year: 2022
- doi: 10.1093/nar/gkp832
  pmc: PMC2808878
  pubmed: '19850722'
  title: GeMInA, Genomic Metadata for Infectious Agents, a geospatial surveillance
    pathogen database.
  year: 2009
repository: https://github.com/DiseaseOntology/PathogenTransmissionOntology
synonyms: []
uri_format: http://purl.obolibrary.org/obo/TRANS_$1
version: '2020-08-04'