{"prefix": "vario", "name": "Variation Ontology", "description": "The Variation Ontology (VariO) is an ontology for the standardized, systematic description of effects, consequences and mechanisms of variations. It describes the effects of variations at the DNA, RNA and/or protein level.", "pattern": "^\\d+$", "uri_format": "http://purl.obolibrary.org/obo/VARIO_$1", "providers": [{"code": "CURATOR_REVIEW", "name": "VariO at Lund University", "description": "VariO at Lund University", "homepage": "http://www.variationontology.org/", "uri_format": "http://www.ontobee.org/search?ontology=VariO&keywords=VariO_$1&submit=Search+terms"}], "homepage": "http://variationontology.org", "contact": {"name": "Mauno Vihinen", "email": "mauno.vihinen@med.lu.se"}, "example": "0376", "version": "2018-11-09", "download_owl": "http://purl.obolibrary.org/obo/vario.owl", "download_obo": "http://purl.obolibrary.org/obo/vario.obo", "banana": "VariO", "deprecated": true, "mappings": {"aberowl": "VARIO", "agroportal": "VARIO", "biocontext": "VARIO", "bioportal": "VARIO", "fairsharing": "FAIRsharing.65xkbs", "miriam": "vario", "n2t": "vario", "obofoundry": "vario", "ols": "vario", "ontobee": "VariO"}, "synonyms": [], "publications": [{"pubmed": "30591019", "doi": "10.1186/s12864-018-5262-0", "pmc": "PMC6309100", "title": "Systematics for types and effects of DNA variations.", "year": 2018}, {"pubmed": "26773573", "doi": "10.1002/humu.22954", "title": "VariOtator, a Software Tool for Variation Annotation with the Variation Ontology.", "year": 2016}, {"pubmed": "25616435", "doi": "10.1007/s00439-015-1529-6", "title": "Types and effects of protein variations.", "year": 2015}, {"pubmed": "24533660", "doi": "10.1186/2041-1480-5-9", "pmc": "PMC3931275", "title": "Variation ontology: annotator guide.", "year": 2014}, {"pubmed": "24162187", "doi": "10.1101/gr.157495.113", "pmc": "PMC3912426", "title": "Variation Ontology for annotation of variation effects and mechanisms.", "year": 2013}], "appears_in": [], "depends_on": [], "namespace_in_lui": true, "preferred_prefix": "VariO"}